Uses of Class
org.proteinshader.math.LocalFrame

Packages that use LocalFrame

org.proteinshader.graphics	Holds the drawing classes: Ribbon, Tube, FrenetFrames, Sphere, and Cylinder.
org.proteinshader.math	The key classes in this package are Hermite and Quaternion, which are needed for generating the ribbons and tubes that are used to represent the backbone of a protein in a cartoon-type display.
org.proteinshader.structure	Holds the classes that store information from a Protein Data Bank file: Structure, Model, Chain, AminoAcid, Heterogen, Water, Atom, Bond, Helix, BetaStrand, Loop, etc.
org.proteinshader.structure.io	Holds the classes needed for reading Protein Data Bank structure files.

Uses of LocalFrame in org.proteinshader.graphics

Methods in org.proteinshader.graphics with parameters of type LocalFrame

int	ExtrudedShape.createDisplayList(GL gl, LocalFrame[] frames) Uses an array of LocalFrame objects to draw a segment of a tube and saves the geometry (a collection of vertices) as an OpenGL display list.
void	Ribbon.createDisplayLists(GL gl, LocalFrame[] frames, SegmentListInfo info) Creates an OpenGL display list for the thin sides of the ribbon, and also calls on the createDisplayLists() method of superclass ExtrudedShape to save the OpenGL display lists for the main (broad surface) part of the ribbon and for the start and end caps.
void	ExtrudedShape.createDisplayLists(GL gl, LocalFrame[] frames, SegmentListInfo info) Creates three OpenGL display lists: one created by calling draw(), one created by calling drawStartCap(), and one created by calling drawEndCap().
int	ExtrudedShape.createEndCapDisplayList(GL gl, LocalFrame[] frames) Uses the last LocalFrame in the array to position a segment end cap that is saved as an OpenGL display list.
int	ExtrudedShape.createStartCapDisplayList(GL gl, LocalFrame[] frames) Uses the first LocalFrame in the array to position a segment start cap that is saved as an OpenGL display list.
int	Ribbon.createThinSidesDisplayList(GL gl, LocalFrame[] frames) Caches an OpenGL display list for the thin sides of a segment of a ribbon.
void	Ribbon.draw(GL gl, LocalFrame[] frames) Uses an array of LocalFrame objects to draw the broad surfaces of of a ribbon.
abstract void	ExtrudedShape.draw(GL gl, LocalFrame[] frames) Uses an array of LocalFrame objects to draw a segment of an extruded shape.
void	Tube.draw(GL gl, LocalFrame[] frames) Uses an array of LocalFrame objects to draw a segment of a tube.
void	FrenetFrames.draw(GL gl, LocalFrame[] frames) Uses an array of LocalFrame objects to draw xyz-axes.
void	FrenetFrames.draw(GL gl, LocalFrame frame, double scale, double sphereRadius, int sphereTiling, float sphereRed, float sphereGreen, float sphereBlue, float sphereAlpha) Draws an xyz-axis based on the rotation and translation in the LocalFrame given as an argument.
void	Ribbon.drawEndCap(GL gl, LocalFrame frame) Creates a cap for the end of a segment by drawing the waist polygon.
abstract void	ExtrudedShape.drawEndCap(GL gl, LocalFrame frame) Creates a cap for the end of a segment by drawing the waist polygon.
void	Tube.drawEndCap(GL gl, LocalFrame frame) Creates a cap for the end of a segment by drawing the waist polygon.
void	FrenetFrames.drawEndCap(GL gl, LocalFrame frame) Draws the local frame using red for the sphere at the base.
void	Ribbon.drawStartCap(GL gl, LocalFrame frame) Creates a cap for the beginning of a segment by drawing the waist polygon.
abstract void	ExtrudedShape.drawStartCap(GL gl, LocalFrame frame) Creates a cap for the beginning of a segment by drawing the waist polygon.
void	Tube.drawStartCap(GL gl, LocalFrame frame) Creates a cap for the beginning of a segment by drawing the waist polygon.
void	FrenetFrames.drawStartCap(GL gl, LocalFrame frame) Draws the local frame using light blue for the sphere at the base.
void	Ribbon.drawThinSideSurfaces(GL gl, LocalFrame[] frames) Draws the thin side surfaces for a segment of a ribbon.

Uses of LocalFrame in org.proteinshader.math

Methods in org.proteinshader.math that return LocalFrame

LocalFrame

LocalFrame.clone() Returns a clone of the calling LocalFrame.

Uses of LocalFrame in org.proteinshader.structure

Methods in org.proteinshader.structure that return LocalFrame

LocalFrame	Segment.getLocalFrame(double t) Creates a LocalFrame along the Segment spline by using Hermite interpolation and SLERP (Spherical Linear intERPolation).
LocalFrame[]	Segment.getLocalFrames(int n) Uses SLERP (Spherical Linear intERPolation) and Hermite interpolation to generate the requested number of LocalFrames from the start frame to the end frame, inclusive.

Uses of LocalFrame in org.proteinshader.structure.io

Methods in org.proteinshader.structure.io with parameters of type LocalFrame

double[][]

TubeVertices.draw(LocalFrame[] frames) Uses an array of LocalFrame objects to draw a segment of a tube.