Uses of Interface
org.proteinshader.structure.IDTest

Packages that use IDTest
org.proteinshader.structure Holds the classes that store information from a Protein Data Bank file: Structure, Model, Chain, AminoAcid, Heterogen, Water, Atom, Bond, Helix, BetaStrand, Loop, etc
 

Uses of IDTest in org.proteinshader.structure
 

Classes in org.proteinshader.structure that implement IDTest
 class AminoAcid
          This concrete subclass of the abstract class Residue stores information on an amino acid in a PDB structure entry.
 class Atom
          Extends abstract class Drawable to add data that is unique to an atom (atomID, type, temperature, occupancy, radius, etc.).
 class BetaStrand
          This concrete subclass of Region holds information specific to a protein BetaStrand.
 class Chain
          A Chain serves as a container for Residues (AminoAcid, Heterogen, and Water) and Regions (Loop, Helix, and BetaStrand).
 class Helix
          This concrete subclass of Region holds information specific to a protein Helix.
 class Heterogen
          This concrete subclass of the abstract class Residue stores information on a heterogen in a PDB structure entry.
 class Loop
          This concrete subclass of Region holds information on the general "loop" regions found between well-defined regions of secondary structure (helices and beta-strands).
 class Model
          A Model serves as a container for one or more Chains.
 class Region
          Abstract class that contains references to a region of a Chain of AminoAcids.
 class Residue
          This abstract class serves as a container for one or more Atoms.
 class Structure
          Structure is the top-level container for objects that store information on a protein structure from the Protein Data Bank.
 class Water
          This concrete subclass of the abstract class Residue stores information on a water molecule in a PDB structure entry.
 



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