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| Packages that use MissingAATypeException | |
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| org.proteinshader.structure | Holds the classes that store information from a Protein Data Bank file: Structure, Model, Chain, AminoAcid, Heterogen, Water, Atom, Bond, Helix, BetaStrand, Loop, etc. |
| Uses of MissingAATypeException in org.proteinshader.structure |
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| Methods in org.proteinshader.structure that throw MissingAATypeException | |
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AminoAcid |
Chain.addNewAminoAcid(AminoAcidEnum type,
String residueID)
Creates a new AminoAcid with the type and Residue ID given as arguments, adds the AminoAcid to the Chain's collection of AminoAcids, and returns a reference to the new AminoAcid. |
Atom |
Structure.addNewAtom(int atomSerialNo,
AtomEnum atomType,
String atomID,
String aminoAcidType,
String residueID,
String chainID,
String modelID,
double temperature,
int charge,
double occupancy,
String altLocation,
double x,
double y,
double z,
VisibilityEnum visibility)
Creates a new atom with the atomID given as an argument, adds the new Atom to the requested Model-Chain-AminoAcid, and then returns a reference to the new Atom. |
| Constructors in org.proteinshader.structure that throw MissingAATypeException | |
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AminoAcid(AminoAcidEnum type,
String residueID,
String chainID,
String modelID,
String structureID)
Constructs an AminoAcid with the type and IDs given as arguments. |
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