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Packages that use org.proteinshader.structure.exceptions | |
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org.proteinshader.gui.components.controlpanel | Holds the JPanels used in the right-side retractable control panel of the GUI. |
org.proteinshader.structure | Holds the classes that store information from a Protein Data Bank file: Structure, Model, Chain, AminoAcid, Heterogen, Water, Atom, Bond, Helix, BetaStrand, Loop, etc. |
org.proteinshader.structure.factory | Holds the factory classes needed for generating the Segment objects that hold the information needed for rendering ribbon and tube segments. |
org.proteinshader.structure.visitor.modifiers | Holds helper classes for the ModifierVisitor class, which is used to modify Drawable objects (Atoms, Bonds, and Segments). |
Classes in org.proteinshader.structure.exceptions used by org.proteinshader.gui.components.controlpanel | |
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ColorOutOfRangeException
Used to report that a color value is out of range. |
Classes in org.proteinshader.structure.exceptions used by org.proteinshader.structure | |
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ColorOutOfRangeException
Used to report that a color value is out of range. |
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InvalidIDException
Used to report that an ID is invalid or missing. |
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InvalidRegionException
Used to report that a Region (Helix or BetaStrand) is invalid because its start and end Residue IDs could not be matched to an existing sequence of Residues in a Chain. |
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MissingAATypeException
Used to report that an AminoAcid did not have a type specified. |
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MissingAtomTypeException
Used to report that an Atom did not have a type specified. |
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MissingHetNameException
Used to report that a heterogen name is missing. |
Classes in org.proteinshader.structure.exceptions used by org.proteinshader.structure.factory | |
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SegmentException
Used to report an error while trying to create a Segment object. |
Classes in org.proteinshader.structure.exceptions used by org.proteinshader.structure.visitor.modifiers | |
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ColorOutOfRangeException
Used to report that a color value is out of range. |
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